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rdkit-mcp-server
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rdkit-mcp-server

Active·★ 42·MIT·Updated 2026-05-04

RDKit MCP Server is an open-source MCP server that enables language models to interact with RDKit through natural language, providing agent-level access to every function in RDKit 2025.3.1 without writing code. It includes a CLI client and supports any MCP-compliant LLM.

#cheminformatics#chemistry#drug-discovery#llm#mcp#mcp-server#mcp-servers#rdkit
$ Install
$ pip install .
↗ Visit site★ GitHub
01

Features

01Seamless integration via Model Context Protocol
02Supports any MCP-compliant language model
03Includes a CLI client for quick experimentation
02

Compatibility

Python
Python
Verified via docs
03

Quick start

1
$ pip install .
04

Use cases

↳Enabling LLMs to perform chemistry tasks via natural language
↳Quickly experimenting with RDKit functions
↳Integrating RDKit into MCP-compliant agents
05

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On this page
01Features02Compatibility03Quick start04Use cases05Alternatives
tandemai-inc /
rdkit-mcp-server
↗

MCP server that enables language models to interact with RDKit through natural language

42MIT
Last commit5mo ago
StatusActive
CategoryDev Tooling
Links
Documentation↗Discussion↗Issues↗Releases↗
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