pubmed-mcp-server
Active·★ 162·Apache-2.0·Updated 2026-10-12
A Model Context Protocol (MCP) server that integrates NCBI E-utilities, providing seven tools for searching PubMed, fetching article metadata and full text, generating citations, exploring MeSH terms, and discovering related research. It supports both STDIO and Streamable HTTP transports, and can run locally or on Cloudflare Workers.
#ai-agents#ai-tools#biomedical#citations#cloudflare-workers#e-utilities#mcp#mcp-server
01
Features
01Complete NCBI E-utilities integration
02Sequential request queue with configurable rate limit compliance
03Hand-rolled citation formatters (APA, MLA, BibTeX, RIS)
04Runs locally or on Cloudflare Workers
05Pluggable authentication and storage backends
02
Compatibility
Bun
Bun
Verified via docs
Node.js
Node.js
Verified via docs
Cloudflare Workers
Cloudflare Workers
Verified via docs
03
Quick start
1
$ git clone https://github.com/cyanheads/pubmed-mcp-server.git
2
$ cd pubmed-mcp-server
3
$ bun install
04
Use cases
↳Literature search and article retrieval for biomedical research
↳Automated citation generation for academic writing
↳Exploring MeSH vocabulary for precise query formulation
05
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